Publications

* authors contributed equally

You can also find my articles on my Google Scholar profile.

2025

Penghui Yang, Kaiyu Jin, Yue Yao, Lijun Jin, Xin Shao, Chengyu Li, Xiaoyan Lu, and Xiaohui Fan. Spatial integration of multi-omics single-cell data with SIMO. Nat Commun 16, 1265 (2025)

Penghui Yang*, Lijun Jin*, Jie Liao*, Kaiyu Jin, Xin Shao, Chengyu Li, Jingyang Qian, Junyun Cheng, Dingyi Yu, Rongfang Guo, Xiao Xu, Xiaoyan Lu, Xiaohui Fan. Revealing spatial multimodal heterogeneity in tissues with SpaTrio. Cell Genom. 2023 Nov 27;3(12):100446.
Dingyi Yu, Penghui Yang, Xiaoyan Lu, Shaoze Huang, Li Liu, Xiaohui Fan. Single-cell RNA sequencing reveals enhanced antitumor immunity after combined application of PD-1 inhibitor and Shenmai injection in non-small cell lung cancer. Cell Commun Signal. 2023 Jul 10;21(1):169.

Kaiyu Jin*, Shan Gao*, Penghui Yang*, Rongfang Guo, Dan Li, Yunsha Zhang, Xiaoyan Lu, Guanwei Fan, Xiaohui Fan. Single-cell RNA sequencing reveals the temporal diversity and dynamics of cardiac immunity after myocardial infarction. Small methods. 2022, e2100752.
Haiping Jiang*, Dingyi Yu*, Penghui Yang*, Rongfang Guo, Mei Kong, Yuan Gao, Xiongfei Yu, Xiaoyan Lu, Xiaohui Fan. Revealing the Transcriptional Heterogeneity of Organ-Specific Metastasis in Human Gastric Cancer Using Single-cell RNA Sequencing. Clinical and Translational Medicine. 2022, 12(2):e730. (Open Science ExcelLent Author Program)
Penghui Yang, Lijun Jin, Jie Liao, Xin Shao, Lu Li, Xiaoyan Lu, Xiaohui Fan. Modern research on Chinese medicine based on single-cell omics: technologies and strategies. China Journal of Chinese Materia Medica. 2022, 47(15): 3977-3985. (Cover Article)